blackoilbioeffectsparams.hpp
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1// -*- mode: C++; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*-
2// vi: set et ts=4 sw=4 sts=4:
3/*
4 This file is part of the Open Porous Media project (OPM).
5
6 OPM is free software: you can redistribute it and/or modify
7 it under the terms of the GNU General Public License as published by
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19 Consult the COPYING file in the top-level source directory of this
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28#ifndef OPM_BLACK_OIL_BIOEFFECTS_PARAMS_HPP
29#define OPM_BLACK_OIL_BIOEFFECTS_PARAMS_HPP
30
31#include <opm/material/common/Tabulated1DFunction.hpp>
32
33#include <vector>
34
35namespace Opm {
36
37#if HAVE_ECL_INPUT
38class EclipseState;
39#endif
40
42template<class Scalar>
44{
45#if HAVE_ECL_INPUT
46 template<bool enableBioeffects , bool enableMICP>
47 void initFromState(const EclipseState& eclState);
48#endif
49
50 using TabulatedFunction = Tabulated1DFunction<Scalar>;
51
52 enum { numDiffCoef = 3 };
53 enum { micrDiffIdx = 0 };
54 enum { oxygDiffIdx = 1 };
55 enum { ureaDiffIdx = 2 };
56
57 std::vector<TabulatedFunction> permfactTable_;
58 std::vector<TabulatedFunction> pcfactTable_;
59
60 std::vector<Scalar> densityBiofilm_{};
61 std::vector<Scalar> densityCalcite_{};
62 std::vector<Scalar> detachmentRate_{};
63 std::vector<Scalar> detachmentExponent_{};
64 std::vector<Scalar> halfVelocityGrowth_{};
65 std::vector<Scalar> halfVelocityUrea_{};
66 std::vector<Scalar> maximumGrowthRate_{};
67 std::vector<Scalar> maximumUreaUtilization_{};
68 std::vector<Scalar> microbialAttachmentRate_{};
69 std::vector<Scalar> microbialDeathRate_{};
70 std::vector<Scalar> oxygenConsumptionFactor_{};
71 std::vector<Scalar> yieldGrowthCoefficient_{};
72 std::vector<Scalar> yieldUreaToCalciteCoefficient_{};
73
74 std::vector<std::vector<Scalar>> bioDiffCoefficient_{};
75};
76
77} // namespace Opm
78
79#endif // OPM_BLACK_OIL_BIOEFFECTS_PARAMS_HPP
Definition: blackoilbioeffectsmodules.hh:43
Struct holding the parameters for the BlackOilBioeffectsModule class.
Definition: blackoilbioeffectsparams.hpp:44
std::vector< Scalar > oxygenConsumptionFactor_
Definition: blackoilbioeffectsparams.hpp:70
std::vector< std::vector< Scalar > > bioDiffCoefficient_
Definition: blackoilbioeffectsparams.hpp:74
std::vector< Scalar > halfVelocityUrea_
Definition: blackoilbioeffectsparams.hpp:65
@ oxygDiffIdx
Definition: blackoilbioeffectsparams.hpp:54
std::vector< Scalar > densityCalcite_
Definition: blackoilbioeffectsparams.hpp:61
std::vector< Scalar > detachmentRate_
Definition: blackoilbioeffectsparams.hpp:62
std::vector< Scalar > halfVelocityGrowth_
Definition: blackoilbioeffectsparams.hpp:64
std::vector< Scalar > microbialDeathRate_
Definition: blackoilbioeffectsparams.hpp:69
std::vector< TabulatedFunction > permfactTable_
Definition: blackoilbioeffectsparams.hpp:57
Tabulated1DFunction< Scalar > TabulatedFunction
Definition: blackoilbioeffectsparams.hpp:50
std::vector< Scalar > maximumUreaUtilization_
Definition: blackoilbioeffectsparams.hpp:67
std::vector< Scalar > yieldGrowthCoefficient_
Definition: blackoilbioeffectsparams.hpp:71
@ ureaDiffIdx
Definition: blackoilbioeffectsparams.hpp:55
std::vector< Scalar > detachmentExponent_
Definition: blackoilbioeffectsparams.hpp:63
@ numDiffCoef
Definition: blackoilbioeffectsparams.hpp:52
std::vector< TabulatedFunction > pcfactTable_
Definition: blackoilbioeffectsparams.hpp:58
std::vector< Scalar > maximumGrowthRate_
Definition: blackoilbioeffectsparams.hpp:66
std::vector< Scalar > microbialAttachmentRate_
Definition: blackoilbioeffectsparams.hpp:68
std::vector< Scalar > yieldUreaToCalciteCoefficient_
Definition: blackoilbioeffectsparams.hpp:72
@ micrDiffIdx
Definition: blackoilbioeffectsparams.hpp:53
std::vector< Scalar > densityBiofilm_
Definition: blackoilbioeffectsparams.hpp:60