overlappingblockvector.hh

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// -*- mode: C++; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*-
// vi: set et ts=4 sw=4 sts=4:
/*
  This file is part of the Open Porous Media project (OPM).

  OPM is free software: you can redistribute it and/or modify
  it under the terms of the GNU General Public License as published by
  the Free Software Foundation, either version 2 of the License, or
  (at your option) any later version.

  OPM is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  GNU General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with OPM.  If not, see <http://www.gnu.org/licenses/>.

  Consult the COPYING file in the top-level source directory of this
  module for the precise wording of the license and the list of
  copyright holders.
*/
#ifndef EWOMS_OVERLAPPING_BLOCK_VECTOR_HH
#define EWOMS_OVERLAPPING_BLOCK_VECTOR_HH

#include "overlaptypes.hh"

#include <opm/models/parallel/mpibuffer.hh>
#include <opm/material/common/Valgrind.hpp>

#include <dune/istl/bvector.hh>
#include <dune/common/fvector.hh>

#include <memory>
#include <map>
#include <iostream>

namespace Opm {
namespace Linear {

template <class FieldVector, class Overlap>
class OverlappingBlockVector : public Dune::BlockVector<FieldVector>
{
    using ParentType = Dune::BlockVector<FieldVector>;
    using BlockVector = Dune::BlockVector<FieldVector>;

public:
    explicit OverlappingBlockVector(const Overlap& overlap)
        : ParentType(overlap.numDomestic()), overlap_(&overlap)
    { createBuffers_(); }

    OverlappingBlockVector(const OverlappingBlockVector& obv)
        : ParentType(obv)
        , numIndicesSendBuff_(obv.numIndicesSendBuff_)
        , indicesSendBuff_(obv.indicesSendBuff_)
        , indicesRecvBuff_(obv.indicesRecvBuff_)
        , valuesSendBuff_(obv.valuesSendBuff_)
        , valuesRecvBuff_(obv.valuesRecvBuff_)
        , overlap_(obv.overlap_)
    {}

    OverlappingBlockVector()
    {}


    using ParentType::operator=;

    OverlappingBlockVector& operator=(const OverlappingBlockVector& obv)
    {
        ParentType::operator=(obv);
        numIndicesSendBuff_ = obv.numIndicesSendBuff_;
        indicesSendBuff_ = obv.indicesSendBuff_;
        indicesRecvBuff_ = obv.indicesRecvBuff_;
        valuesSendBuff_ = obv.valuesSendBuff_;
        valuesRecvBuff_ = obv.valuesRecvBuff_;
        overlap_ = obv.overlap_;
        return *this;
    }

    template <class BlockVector>
    void assignAddBorder(const BlockVector& nativeBlockVector)
    {
        size_t numDomestic = overlap_->numDomestic();

        // assign the local rows from the non-overlapping block vector
        for (unsigned domRowIdx = 0; domRowIdx < numDomestic; ++domRowIdx) {
            Index nativeRowIdx = overlap_->domesticToNative(static_cast<Index>(domRowIdx));
            if (nativeRowIdx < 0)
                (*this)[domRowIdx] = 0.0;
            else
                (*this)[domRowIdx] = nativeBlockVector[nativeRowIdx];
        }

        // add up the contents of the overlapping rows. Since non-native rows are set to
        // zero above, the addition is only different from an assignment if the row is
        // shared amongst multiple ranks.
        syncAdd();
    }

    template <class NativeBlockVector>
    void assign(const NativeBlockVector& nativeBlockVector)
    {
        Index numDomestic = overlap_->numDomestic();

        // assign the local rows from the non-overlapping block vector
        for (Index domRowIdx = 0; domRowIdx < numDomestic; ++domRowIdx) {
            Index nativeRowIdx = overlap_->domesticToNative(domRowIdx);
            if (nativeRowIdx < 0)
                (*this)[static_cast<unsigned>(domRowIdx)] = 0.0;
            else
                (*this)[static_cast<unsigned>(domRowIdx)] = nativeBlockVector[static_cast<unsigned>(nativeRowIdx)];
        }

        // add up the contents of border rows, for the remaining rows,
        // get the values from their respective master process.
        sync();
    }

    template <class NativeBlockVector>
    void assignTo(NativeBlockVector& nativeBlockVector) const
    {
        // assign the local rows
        size_t numNative = overlap_->numNative();
        nativeBlockVector.resize(numNative);
        for (unsigned nativeRowIdx = 0; nativeRowIdx < numNative; ++nativeRowIdx) {
            Index domRowIdx = overlap_->nativeToDomestic(static_cast<Index>(nativeRowIdx));

            if (domRowIdx < 0)
                nativeBlockVector[nativeRowIdx] = 0.0;
            else
                nativeBlockVector[nativeRowIdx] = (*this)[static_cast<unsigned>(domRowIdx)];
        }
    }

    void sync()
    {
        // send all entries to all peers
        for (const auto peerRank: overlap_->peerSet())
            sendEntries_(peerRank);

        // recieve all entries to the peers
        for (const auto peerRank: overlap_->peerSet())
            receiveFromMaster_(peerRank);

        // wait until we have send everything
        waitSendFinished_();
    }

    void syncAdd()
    {
        // send all entries to all peers
        for (const auto peerRank: overlap_->peerSet())
            sendEntries_(peerRank);

        // recieve all entries to the peers
        for (const auto peerRank: overlap_->peerSet())
            receiveAdd_(peerRank);

        // wait until we have send everything
        waitSendFinished_();
    }

    void print() const
    {
        for (unsigned i = 0; i < this->size(); ++i) {
            std::cout << "row " << i << (overlap_->isLocal(i) ? " " : "*")
                      << ": " << (*this)[i] << "\n" << std::flush;
        }
    }

private:
    void createBuffers_()
    {
#if HAVE_MPI
        // create array for the front indices
        typename PeerSet::const_iterator peerIt;
        typename PeerSet::const_iterator peerEndIt = overlap_->peerSet().end();

        // send all indices to the peers
        peerIt = overlap_->peerSet().begin();
        for (; peerIt != peerEndIt; ++peerIt) {
            ProcessRank peerRank = *peerIt;

            size_t numEntries = overlap_->foreignOverlapSize(peerRank);
            numIndicesSendBuff_[peerRank] = std::make_shared<MpiBuffer<unsigned> >(1);
            indicesSendBuff_[peerRank] = std::make_shared<MpiBuffer<Index> >(numEntries);
            valuesSendBuff_[peerRank] = std::make_shared<MpiBuffer<FieldVector> >(numEntries);

            // fill the indices buffer with global indices
            MpiBuffer<Index>& indicesSendBuff = *indicesSendBuff_[peerRank];
            for (unsigned i = 0; i < numEntries; ++i) {
                Index domRowIdx = overlap_->foreignOverlapOffsetToDomesticIdx(peerRank, i);
                indicesSendBuff[i] = overlap_->domesticToGlobal(domRowIdx);
            }

            // first, send the number of indices
            (*numIndicesSendBuff_[peerRank])[0] = static_cast<unsigned>(numEntries);
            numIndicesSendBuff_[peerRank]->send(peerRank);

            // then, send the indices themselfs
            indicesSendBuff.send(peerRank);
        }

        // receive the indices from the peers
        peerIt = overlap_->peerSet().begin();
        for (; peerIt != peerEndIt; ++peerIt) {
            ProcessRank peerRank = *peerIt;

            // receive size of overlap to peer
            MpiBuffer<unsigned> numRowsRecvBuff(1);
            numRowsRecvBuff.receive(peerRank);
            unsigned numRows = numRowsRecvBuff[0];

            // then, create the MPI buffers
            indicesRecvBuff_[peerRank] = std::shared_ptr<MpiBuffer<Index> >(
                new MpiBuffer<Index>(numRows));
            valuesRecvBuff_[peerRank] = std::shared_ptr<MpiBuffer<FieldVector> >(
                new MpiBuffer<FieldVector>(numRows));
            MpiBuffer<Index>& indicesRecvBuff = *indicesRecvBuff_[peerRank];

            // next, receive the actual indices
            indicesRecvBuff.receive(peerRank);

            // finally, translate the global indices to domestic ones
            for (unsigned i = 0; i != numRows; ++i) {
                Index globalRowIdx = indicesRecvBuff[i];
                Index domRowIdx = overlap_->globalToDomestic(globalRowIdx);

                indicesRecvBuff[i] = domRowIdx;
            }
        }

        // wait for all send operations to complete
        peerIt = overlap_->peerSet().begin();
        for (; peerIt != peerEndIt; ++peerIt) {
            ProcessRank peerRank = *peerIt;
            numIndicesSendBuff_[peerRank]->wait();
            indicesSendBuff_[peerRank]->wait();

            // convert the global indices of the send buffer to
            // domestic ones
            MpiBuffer<Index>& indicesSendBuff = *indicesSendBuff_[peerRank];
            for (unsigned i = 0; i < indicesSendBuff.size(); ++i) {
                indicesSendBuff[i] = overlap_->globalToDomestic(indicesSendBuff[i]);
            }
        }
#endif // HAVE_MPI
    }

    void sendEntries_(ProcessRank peerRank)
    {
        // copy the values into the send buffer
        const MpiBuffer<Index>& indices = *indicesSendBuff_[peerRank];
        MpiBuffer<FieldVector>& values = *valuesSendBuff_[peerRank];
        for (unsigned i = 0; i < indices.size(); ++i)
            values[i] = (*this)[static_cast<unsigned>(indices[i])];

        values.send(peerRank);
    }

    void waitSendFinished_()
    {
        typename PeerSet::const_iterator peerIt;
        typename PeerSet::const_iterator peerEndIt = overlap_->peerSet().end();

        // send all entries to all peers
        peerIt = overlap_->peerSet().begin();
        for (; peerIt != peerEndIt; ++peerIt) {
            ProcessRank peerRank = *peerIt;
            valuesSendBuff_[peerRank]->wait();
        }
    }

    void receiveFromMaster_(ProcessRank peerRank)
    {
        const MpiBuffer<Index>& indices = *indicesRecvBuff_[peerRank];
        MpiBuffer<FieldVector>& values = *valuesRecvBuff_[peerRank];

        // receive the values from the peer
        values.receive(peerRank);

        // copy them into the block vector
        for (unsigned j = 0; j < indices.size(); ++j) {
            Index domRowIdx = indices[j];
            if (overlap_->masterRank(domRowIdx) == peerRank) {
                (*this)[static_cast<unsigned>(domRowIdx)] = values[j];
            }
        }
    }

    void receiveAdd_(ProcessRank peerRank)
    {
        const MpiBuffer<Index>& indices = *indicesRecvBuff_[peerRank];
        MpiBuffer<FieldVector>& values = *valuesRecvBuff_[peerRank];

        // receive the values from the peer
        values.receive(peerRank);

        // add up the values of rows on the shared boundary
        for (unsigned j = 0; j < indices.size(); ++j) {
            Index domRowIdx = indices[j];
            (*this)[static_cast<unsigned>(domRowIdx)] += values[j];
        }
    }

    std::map<ProcessRank, std::shared_ptr<MpiBuffer<unsigned> > > numIndicesSendBuff_;
    std::map<ProcessRank, std::shared_ptr<MpiBuffer<Index> > > indicesSendBuff_;
    std::map<ProcessRank, std::shared_ptr<MpiBuffer<Index> > > indicesRecvBuff_;
    std::map<ProcessRank, std::shared_ptr<MpiBuffer<FieldVector> > > valuesSendBuff_;
    std::map<ProcessRank, std::shared_ptr<MpiBuffer<FieldVector> > > valuesRecvBuff_;

    const Overlap *overlap_;
};

} // namespace Linear
} // namespace Opm

#endif