[Opm] Error using mpirun after compiling from source

[Mohd]

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> On 25 Aug 2020, at 11:32 PM, Josimar Alves da Silva <jsilva.mit at gmail.com> wrote:
> 
> Hi Markus,
> 
> Thank you very much for the reply. I checked and it seems that I have
> Ubuntu 18.04bionic. See below.
> 
> If I understood correctly, according to the Note 1 that you mentioned, the
> way to fix this issue is to install the mpi package provided by opm. Could
> you comment on how to do this? Alternatively, would it be possible to
> direct me to some documentation that helps me to install the mpi properly,
> then to rebuild the source codes using the correct mpi installation?
> 
> Thank you in advance,
> Josimar
> 
> 
> Operating System: Ubuntu 18.04.4 LTS
> 
>            Kernel: Linux 4.15.0-1093-oem
> 
>      Architecture: x86-64
> 
>> On Tue, Aug 25, 2020 at 2:39 PM Markus Blatt <markus.blatt at opm-op.com>
>> wrote:
>> 
>> Hi Josimar,
>> 
>>> On Tue, Aug 25, 2020 at 01:23:41PM -0400, Josimar Alves da Silva wrote:
>>> [...] I compiled the prerequisites and the
>>> opm modules from source on a Ubuntu machine. The opm version that I used
>> is
>>> the 2020.10-pre from the master branch. [...]
>>> 
>>> However, when I try to run the same dataset using mpirun I get an error
>>> message. I copy below the error message and I can send the complete
>> output
>>> message if needed. The command that I called was:
>>> 
>>> mpirun -np 2 flow --parameter-file=NORNE_JS.PARAM
>>> 
>>> [...]
>>> 
>>> Could you please help me to understand why the mpirun does not work?
>> [...]
>>> 
>>> Summary of the error message:
>>> 
>>> Warning: Region to region summary keyword: RGFT at
>>> /home/josimar/OPM/test/norne/INCLUDE/SUMMARY/summary.data, line 74 is
>>> ignored [0m
>>> [34;1m
>>> Warning: Region to region summary keyword: RWFT at
>>> /home/josimar/OPM/test/norne/INCLUDE/SUMMARY/summary.data, line 76 is
>>> ignored [0m
>>> [GRS4:11127] *** Process received signal ***
>>> [GRS4:11127] Signal: Segmentation fault (11)
>>> [GRS4:11127] Signal code: Address not mapped (1)
>>> [GRS4:11127] Failing at address: 0x55b34de1a000
>>> [GRS4:11127] [ 0]
>>> /lib/x86_64-linux-gnu/libpthread.so.0(+0x128a0)[0x7fd966bc38a0]
>>> [GRS4:11127] [ 1]
>> /lib/x86_64-linux-gnu/libc.so.6(+0x18f046)[0x7fd964ef7046]
>>> [GRS4:11127] [ 2]
>>> 
>> /usr/lib/x86_64-linux-gnu/libtrilinos_zoltan.so.12(Zoltan_Comm_Do_Post+0xb48)[0x7fd96579f028]
>>> [GRS4:11127] [ 3]
>>> 
>> /usr/lib/x86_64-linux-gnu/libtrilinos_zoltan.so.12(Zoltan_Comm_Do_Reverse+0x4d)[0x7fd96579f62d]
>>> [GRS4:11127] [ 4]
>>> [...]
>> 
>> 
>> it is hard to say, what goes wrong here, apart from stating that it seems
>> to happen
>> deep down inside the loadlancing of the ZOLTAN library that we use. That
>> is aslo the
>> reason why it does not happend without mpirun.
>> 
>> 
>> What Ubuntu version are you using. There have been issues with MPI on
>> Ubuntu 18.04bionic.
>> See https://opm-project.org/?page_id=245 Note 1 for a workaround. You
>> will need to install
>> the mpi packages provided by us instead of the official Ubuntu ones.
>> 
>> If you are using another version, then please:
>> 
>> To gain some insight somebody would need to replicate the setup. Would you
>> mind
>> sharing the parameter file.
>> 
>> HTH,
>> 
>> Markus
>> 
>> --
>> Markus Blatt
>> CTO @ OPM-OP AS, Heyerdahlsvei 12b, 0777 Oslo, Norway
>> https://opm-op.com | +4916097590858
>> _______________________________________________
>> Opm mailing list
>> Opm at opm-project.org
>> https://opm-project.org/cgi-bin/mailman/listinfo/opm
>> 
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