[Opm] Segmentation fault using openporousmedia/opmreleases:latest

Andres Codas andrescodas at gmail.com
Fri Dec 14 21:39:37 UTC 2018


Hi
   I get the error bellow when using openporousmedia/opmreleases:latest.
The problem runs with openporousmedia/opmreleases:2017.04

    Is it a known issue?  How can I solve it?
    Cheers,
    Andres


docker run --rm -t -v "${PWD}":/shared_host
openporousmedia/opmreleases:latest flow
--output-dir="/shared_host/output/" /shared_host/deck.DATA
libibverbs: Warning: couldn't open config directory '/etc/libibverbs.d'.
libibverbs: Warning: no userspace device-specific driver found for
/sys/class/infiniband_verbs/uverbs0
--------------------------------------------------------------------------
[[56069,1],0]: A high-performance Open MPI point-to-point messaging module
was unable to find any relevant network interfaces:

Module: OpenFabrics (openib)
  Host: e3a21ed3293e

Another transport will be used instead, although this may result in
lower performance.
--------------------------------------------------------------------------
**********************************************************************
*                                                                    *
*                        This is flow 2018.10                        *
*                                                                    *
* Flow is a simulator for fully implicit three-phase black-oil flow, *
*             including solvent and polymer capabilities.            *
*          For more information, see https://opm-project.org          *
*                                                                    *
**********************************************************************

[e3a21ed3293e:00001] *** Process received signal ***
[e3a21ed3293e:00001] Signal: Segmentation fault (11)
[e3a21ed3293e:00001] Signal code: Address not mapped (1)
[e3a21ed3293e:00001] Failing at address: 0x8
[e3a21ed3293e:00001] [ 0]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x11390)[0x7f3338197390]
[e3a21ed3293e:00001] [ 1]
/usr/lib/x86_64-linux-gnu/libecl.so.2(fortio_get_FILE+0x0)[0x7f3336adb800]
[e3a21ed3293e:00001] [ 2]
/usr/lib/x86_64-linux-gnu/libecl.so.2(_Z20ecl_kw_fwrite_headerPK13ecl_kw_structP13fortio_struct+0x2a)[0x7f3336acf6da]
[e3a21ed3293e:00001] [ 3]
/usr/lib/x86_64-linux-gnu/libecl.so.2(ecl_kw_fwrite+0x2a)[0x7f3336ad108a]
[e3a21ed3293e:00001] [ 4]
/usr/lib/x86_64-linux-gnu/libecl.so.2(ecl_init_file_fwrite_header+0x142)[0x7f3336ab9592]
[e3a21ed3293e:00001] [ 5]
/usr/lib/x86_64-linux-gnu/libopmcommon.so.2018(_ZNK3Opm9EclipseIO4Impl13writeINITFileERKNS_4data8SolutionESt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIiSaIiEESt4lessISC_ESaISt4pairIKSC_SF_EEERKNS_3NNCE+0x1e6)[0x7f3337611726]
[e3a21ed3293e:00001] [ 6]
/usr/lib/x86_64-linux-gnu/libopmcommon.so.2018(_ZN3Opm9EclipseIO12writeInitialENS_4data8SolutionESt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIiSaIiEESt4lessIS9_ESaISt4pairIKS9_SC_EEERKNS_3NNCE+0x13b)[0x7f333761248b]
[e3a21ed3293e:00001] [ 7]
flow(_ZN5Ewoms10EclProblemINS_10Properties4TTag22EclFlowOilWaterProblemEE10finishInitEv+0x93e)[0xbc230e]
[e3a21ed3293e:00001] [ 8]
flow(_ZN5Ewoms9SimulatorINS_10Properties4TTag22EclFlowOilWaterProblemEEC1Eb+0x1946)[0xbc5a36]
[e3a21ed3293e:00001] [ 9]
flow(_ZN3Opm12FlowMainEbosIN5Ewoms10Properties4TTag22EclFlowOilWaterProblemEE18setupEbosSimulatorEv+0x3b)[0xbd733b]
[e3a21ed3293e:00001] [10]
flow(_ZN3Opm12FlowMainEbosIN5Ewoms10Properties4TTag22EclFlowOilWaterProblemEE7executeEiPPc+0xdc)[0xbe8b8c]
[e3a21ed3293e:00001] [11]
flow(_ZN3Opm20flowEbosOilWaterMainEiPPc+0x130)[0xb1f7c0]
[e3a21ed3293e:00001] [12] flow(main+0x805)[0x75c845]
[e3a21ed3293e:00001] [13]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf0)[0x7f3335bdc830]
[e3a21ed3293e:00001] [14] flow(_start+0x29)[0x76a5a9]
[e3a21ed3293e:00001] *** End of error message ***


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